论文标题

在低树宽网络中嵌入系统发育树

Embedding phylogenetic trees in networks of low treewidth

论文作者

van Iersel, Leo, Jones, Mark, Weller, Mathias

论文摘要

给定一个生根的二元系统发育网络和根生的二元系统发育树,可以将树嵌入网络中吗? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic inference methods.We present the first algorithm for (rooted) \textsc{Tree Containment} using the treewidth $t$ of the input network $N$ as parameter, showing that the problem can be solved in $2^{O(t^2)}\cdot|N|$ time and space.

Given a rooted, binary phylogenetic network and a rooted, binary phylogenetic tree, can the tree be embedded into the network? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic inference methods.We present the first algorithm for (rooted) \textsc{Tree Containment} using the treewidth $t$ of the input network $N$ as parameter, showing that the problem can be solved in $2^{O(t^2)}\cdot|N|$ time and space.

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