论文标题

RESTAINNET:一种自我监督的数字重新污渍,用于染色归一化

RestainNet: a self-supervised digital re-stainer for stain normalization

论文作者

Zhao, Bingchao, Lin, Jiatai, Liang, Changhong, Yi, Zongjian, Chen, Xin, Li, Bingbing, Qiu, Weihao, Li, Danyi, Liang, Li, Han, Chu, Liu, Zaiyi

论文摘要

颜色不一致是计算病理学中不可避免的挑战,通常由于染色强度变化或不同扫描仪扫描的部分而发生。它损害病理图像分析方法,尤其是基于学习的模型。已经提出了一系列用于染色标准化的方法。但是,大多数在实践中缺乏灵活性。在本文中,我们将染色归一化作为数字重新染色过程,并提出了一种自制的学习模型,称为RESTAINNET。我们的网络被视为数字休息器,该数字休息器学习如何重新染色(灰度)图像。 Beer-Lambert的定律从原始图像中提取了两种数字污渍,苏木精(H)和曙红(E)。我们提出了染色损失,以保持休息过程中污渍强度的正确性。多亏了自我监督的性质,不再需要配对的培训样本,这表明实际使用方面非常灵活。我们的Restainnet在颜色正确性和结构保存方面都优于现有方法,并实现最先进的性能。我们进一步进行了有关分割和分类任务的实验,与SOTA方法相比,提出的RESTAINNET取得了出色的性能。自我监督的设计使网络可以在没有额外努力的情况下学习任何染色样式。

Color inconsistency is an inevitable challenge in computational pathology, which generally happens because of stain intensity variations or sections scanned by different scanners. It harms the pathological image analysis methods, especially the learning-based models. A series of approaches have been proposed for stain normalization. However, most of them are lack flexibility in practice. In this paper, we formulated stain normalization as a digital re-staining process and proposed a self-supervised learning model, which is called RestainNet. Our network is regarded as a digital restainer which learns how to re-stain an unstained (grayscale) image. Two digital stains, Hematoxylin (H) and Eosin (E) were extracted from the original image by Beer-Lambert's Law. We proposed a staining loss to maintain the correctness of stain intensity during the restaining process. Thanks to the self-supervised nature, paired training samples are no longer necessary, which demonstrates great flexibility in practical usage. Our RestainNet outperforms existing approaches and achieves state-of-the-art performance with regard to color correctness and structure preservation. We further conducted experiments on the segmentation and classification tasks and the proposed RestainNet achieved outstanding performance compared with SOTA methods. The self-supervised design allows the network to learn any staining style with no extra effort.

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