论文标题
新型机器学习方法,用于提高功能性MRI功能和有效连通性的可重复性和可靠性
Novel Machine Learning Approaches for Improving the Reproducibility and Reliability of Functional and Effective Connectivity from Functional MRI
论文作者
论文摘要
目的:需要采取新的人脑连通性措施来解决现有措施中的差距,并促进研究脑功能,认知能力并确定人类疾病的早期标志。传统的方法来测量功能MRI中大脑区域对之间的功能连通性,例如相关性和部分相关性,无法捕获区域关联中的非线性方面。我们提出了一种基于机器学习的新功能连接性量度,可有效捕获线性和非线性方面。方法:我们提出了两项新的EC措施。首先是基于机器学习的有效连通性的度量,可以测量整个大脑的非线性方面。第二个结构投影的Granger因果关系适应了Granger因果关系,以有效地表征并将整个大脑EC连接组定向,以尊重生物学结构连接的潜在。将所提出的措施与传统措施在可重复性和预测各个性状的能力方面进行了比较,以证明这些措施内部有效性。我们使用人类连接项目中相同个体的四次重复扫描,并衡量措施预测个体受试者生理和认知特征的能力。主要结果:拟议的新FC ML.FC量度具有0.44平方的高可重现性,而拟议的SP.GC的EC量度则具有最高的预测能力,R平方为0.66。意义:所提出的方法非常适合实现高可重现性和预测性。
Objective: New measures of human brain connectivity are needed to address gaps in the existing measures and facilitate the study of brain function, cognitive capacity, and identify early markers of human disease. Traditional approaches to measure functional connectivity between pairs of brain regions in functional MRI, such as correlation and partial correlation, fail to capture nonlinear aspects in the regional associations. We propose a new machine learning based measure of functional connectivity which efficiently captures linear and nonlinear aspects. Approach: We propose two new EC measures. The first, a machine learning based measure of effective connectivity, measures nonlinear aspects across the entire brain. The second, Structurally Projected Granger Causality adapts Granger Causal connectivity to efficiently characterize and regularize the whole brain EC connectome to respect underlying biological structural connectivity. The proposed measures are compared to traditional measures in terms of reproducibility and the ability to predict individual traits in order to demonstrate these measures internal validity. We use four repeat scans of the same individuals from the Human Connectome Project and measure the ability of the measures to predict individual subject physiologic and cognitive traits. Main results: The proposed new FC measure of ML.FC attains high reproducibility with an R squared of 0.44, while the proposed EC measure of SP.GC attains the highest predictive power with an R squared of 0.66. Significance: The proposed methods are highly suitable for achieving high reproducibility and predictiveness.