论文标题
基于转移学习的主动学习框架,用于脑肿瘤分类
A Transfer Learning Based Active Learning Framework for Brain Tumor Classification
论文作者
论文摘要
脑肿瘤是在儿童和成人中全球癌症相关死亡的主要原因之一。早期脑肿瘤级(低度和高级神经胶质瘤)的精确分类在成功的预后和治疗计划中起着关键作用。随着深度学习的最新进展,基于人工智能的脑肿瘤分级系统可以在几秒钟内帮助放射科医生解释医学图像。但是,深度学习技术的性能高度取决于注释数据集的大小。鉴于医疗数据的复杂性和数量,标记大量医学图像是极具挑战性的。在这项工作中,我们提出了一个基于转移学习的新型主动学习框架,以降低注释成本,同时保持模型性能的稳定性和用于脑肿瘤分类的稳健性。我们采用了一种基于2片的方法来训练和捕获203名患者的磁共振成像(MRI)训练数据集的模型,以及66名用作基线的患者的验证数据集。通过我们提出的方法,该模型在接收器操作特征(ROC)曲线(AUC)下达到了82.89%的66例患者的测试数据集,比基线AUC高2.92%,同时节省了至少40%的标签成本。为了进一步检查我们方法的鲁棒性,我们创建了一个平衡的数据集,该数据集接受了相同的过程。该模型的AUC达到了82%,而基线的AUC为78.48%,这使我们提出的转移学习的稳健性和稳定性增强,并通过主动学习框架增加了,同时大大降低了培训数据的大小。
Brain tumor is one of the leading causes of cancer-related death globally among children and adults. Precise classification of brain tumor grade (low-grade and high-grade glioma) at early stage plays a key role in successful prognosis and treatment planning. With recent advances in deep learning, Artificial Intelligence-enabled brain tumor grading systems can assist radiologists in the interpretation of medical images within seconds. The performance of deep learning techniques is, however, highly depended on the size of the annotated dataset. It is extremely challenging to label a large quantity of medical images given the complexity and volume of medical data. In this work, we propose a novel transfer learning based active learning framework to reduce the annotation cost while maintaining stability and robustness of the model performance for brain tumor classification. We employed a 2D slice-based approach to train and finetune our model on the Magnetic Resonance Imaging (MRI) training dataset of 203 patients and a validation dataset of 66 patients which was used as the baseline. With our proposed method, the model achieved Area Under Receiver Operating Characteristic (ROC) Curve (AUC) of 82.89% on a separate test dataset of 66 patients, which was 2.92% higher than the baseline AUC while saving at least 40% of labeling cost. In order to further examine the robustness of our method, we created a balanced dataset, which underwent the same procedure. The model achieved AUC of 82% compared with AUC of 78.48% for the baseline, which reassures the robustness and stability of our proposed transfer learning augmented with active learning framework while significantly reducing the size of training data.