论文标题

带有开放量子系统和仪器的生物学中的量子样建模

Quantum-like modeling in biology with open quantum systems and instruments

论文作者

Basieva, Irina, Khrennikov, Andrei, Ozawa, Masanao

论文摘要

我们介绍了生物系统中信息过程数学建模的新方法。它探讨了量子理论的数学形式主义和方法论,尤其是量子测量理论。这种方法被称为{\ it类似量子样},应与研究生物系统中的真正量子物理过程(量子生物物理学,量子认知)的研究。它基于生物系统状态的量子信息表示,并在开放量子系统理论框架中对其动态进行建模。本文始于量子测量理论的非物理学友好介绍,从原始的von Neumann公式到量子仪器的现代理论。然后,将后者应用于大肠杆菌中葡萄糖/乳糖代谢的认知作用和基因调节基因的组合。量子仪器的最一般结构是基于间接测量方案,因为测量设备在生物系统中起着环境的作用。 Helmholtz感觉感知理论的量子形式化说明了该方案的生物学本质。然后,我们转移到打开系统动力学并考虑量子主方程,重点关注量子马尔可夫过程。在此框架中,我们模拟了生物学功能(例如心理功能和表观遗传突变)的功能。

We present the novel approach to mathematical modeling of information processes in biosystems. It explores the mathematical formalism and methodology of quantum theory, especially quantum measurement theory. This approach is known as {\it quantum-like} and it should be distinguished from study of genuine quantum physical processes in biosystems (quantum biophysics, quantum cognition). It is based on quantum information representation of biosystem's state and modeling its dynamics in the framework of theory of open quantum systems. This paper starts with the non-physicist friendly presentation of quantum measurement theory, from the original von Neumann formulation to modern theory of quantum instruments. Then, latter is applied to model combinations of cognitive effects and gene regulation of glucose/lactose metabolism in Escherichia coli bacterium. The most general construction of quantum instruments is based on the scheme of indirect measurement, in that measurement apparatus plays the role of the environment for a biosystem. The biological essence of this scheme is illustrated by quantum formalization of Helmholtz sensation-perception theory. Then we move to open systems dynamics and consider quantum master equation, with concentrating on quantum Markov processes. In this framework, we model functioning of biological functions such as psychological functions and epigenetic mutation.

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