论文标题

基于数字病理学的细胞和组织水平形态特征研究浆液边界卵巢肿瘤和高级浆液卵巢癌

Digital pathology-based study of cell- and tissue-level morphologic features in serous borderline ovarian tumor and high-grade serous ovarian cancer

论文作者

Jiang, Jun, Tekin, Burak, Guo, Ruifeng, Liu, Hongfang, Huang, Yajue, Wang, Chen

论文摘要

浆液性卵巢肿瘤(SBOT)和高级浆液卵巢癌(HGSOC)是上皮卵巢肿瘤的两个不同亚型,具有显着不同的生物背景,行为,预后和治疗。但是,浆液卵巢肿瘤的组织学诊断可能是主观可变和劳动力密集的,因为需要对多个肿瘤幻灯片/块进行彻底检查才能搜索这些特征。在这项研究中,我们旨在评估使用数字病理方法来促进SBOT和HGSOC的客观和可扩展诊断筛查的技术可行性。基于Groovy脚本和Quath,开发了一种新颖的信息系统,以促进互动注释和成像数据交换,以实现机器学习目的。通过该开发的系统,检测到细胞边界并提取了扩展的细胞特征集以表示细胞和组织水平的特征。根据我们的评估,对于肿瘤和基质细胞,精度超过90%的肿瘤和基质细胞都可以准确实现细胞水平分类。经过进一步的重新检查后,有44.2%的错误分类细胞是由于过度/不足的成像或成像区域低质量引起的。对于带有足够肿瘤和基质细胞的6,485个成像斑(至少为10个),我们达到了91-95%的精度,以区分HGSOC诉SBOT。当所有斑块都考虑到WSI进行共识预测时,可以准确地对所有患者进行分类,这表明从病理性图像中提取的细胞特征可用于细胞分类和SBOTv。HGSOC分化。将数字病理学引入卵巢癌研究可能有益于发现潜在的临床意义。

Serous borderline ovarian tumor (SBOT) and high-grade serous ovarian cancer (HGSOC) are two distinct subtypes of epithelial ovarian tumors, with markedly different biologic background, behavior, prognosis, and treatment. However, the histologic diagnosis of serous ovarian tumors can be subjectively variable and labor-intensive as multiple tumor slides/blocks need to be thoroughly examined to search for these features. In this study, we aimed to evaluate technical feasibility of using digital pathological approaches to facilitate objective and scalable diagnosis screening for SBOT and HGSOC. Based on Groovy scripts and QuPath, a novel informatics system was developed to facilitate interactive annotation and imaging data exchange for machine learning purposes. Through this developed system, cellular boundaries were detected and expanded set of cellular features were extracted to represent cell- and tissue-level characteristics. According to our evaluation, cell-level classification was accurately achieved for both tumor and stroma cells with greater than 90% accuracy. Upon further re-examinations, 44.2% of the misclassified cells were due to over-/under-segmentations or low-quality of imaging areas. For a total number of 6,485 imaging patches with sufficient tumor and stroma cells (ten of each at least), we achieved 91-95% accuracy to differentiate HGSOC v. SBOT. When all the patches were considered for a WSI to make consensus prediction, 97% accuracy was achieved for accurately classifying all patients, indicating that cellular features digitally extracted from pathological images can be used for cell classification and SBOT v. HGSOC differentiation. Introducing digital pathology into ovarian cancer research could be beneficial to discover potential clinical implications.

扫码加入交流群

加入微信交流群

微信交流群二维码

扫码加入学术交流群,获取更多资源