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Due to their high computational efficiency on a continuous space, gradient optimization methods have shown great potential in the neural architecture search (NAS) domain. The mapping of network representation from the discrete space to a latent space is the key to discovering novel architectures, however, existing gradient-based methods fail to fully characterize the networks. In this paper, we propose an efficient NAS approach to optimize network architectures in a continuous space, where the latent space is built upon variational autoencoder (VAE) and graph neural networks (GNN). The framework jointly learns four components: the encoder, the performance predictor, the complexity predictor and the decoder in an end-to-end manner. The encoder and the decoder belong to a graph VAE, mapping architectures between continuous representations and network architectures. The predictors are two regression models, fitting the performance and computational complexity, respectively. Those predictors ensure the discovered architectures characterize both excellent performance and high computational efficiency. Extensive experiments demonstrate our framework not only generates appropriate continuous representations but also discovers powerful neural architectures.