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Recent simulations indicate that streamwise-preferential porous materials have the potential to reduce drag in wall-bounded turbulent flows(Gomez-de-Segura & Garcia-Mayoral 2019). This paper extends the resolvent formulation to study the effect of such anisotropic permeable substrates on turbulent channel flow. Under the resolvent formulation, the Fourier-transformed Navier-Stokes equations are interpreted as a linear forcing-response system. The nonlinear terms are considered the endogenous forcing in the system that gives rise to a velocity and pressure response. A gain-based decomposition of the forcing-response transfer function---the resolvent operator---identifies response modes (resolvent modes) that are known to reproduce important structural and statistical features of wall-bounded turbulent flows. The effect of permeable substrates is introduced in this framework using the Volume-Averaged Navier-Stokes equations and a generalized form of Darcy's law. Substrates with high streamwise permeability and low spanwise permeability are found to suppress the forcing-response gain for the resolvent mode that serves as a surrogate for the energetic near-wall cycle. This reduction in mode gain is shown to be consistent with the drag reduction trends predicted by theory and observed in numerical simulations. Simulation results indicate that drag reduction is limited by the emergence of spanwise rollers resembling Kelvin-Helmholtz vortices beyond a threshold value of wall-normal permeability. The resolvent framework also predicts the conditions in which such energetic spanwise-coherent rollers emerge. These findings suggest that a limited set of resolvent modes can serve as the building blocks for computationally-efficient models that enable the design and optimization of permeable substrates for passive turbulence control.