论文标题
识别微观快照中的放大水平
Recognizing Magnification Levels in Microscopic Snapshots
论文作者
论文摘要
数字成像的最新进展将计算机视觉和机器学习转变为用于分析病理图像的新工具。这种趋势可以自动化诊断病理学中的某些任务,并提高病理学家的工作量。任何癌症诊断程序的最后一步是由专家病理学家执行的。这些专家使用具有高度光学放大倍率的显微镜观察通过活检获得的组织的微小特征并固定在载玻片上。在不同的宏伟元素之间切换,并找到识别恶性组织存在或不存在的放大率很重要。由于大多数病理学家仍然使用光学显微镜,与数字扫描仪相比,在许多实例中,显微镜上的安装相机用于捕获重要视野的快照。此类快照的存储库通常不包含放大信息。在本文中,我们提取了TCGA数据集上可用的图像的深度功能,并具有已知放大倍率,以训练分类器以识别放大。我们将结果与LBP进行了比较,LBP是一种众所周知的手工特征提取方法。当多层感知器被培训为分类器时,提出的方法达到了96%的平均准确性。
Recent advances in digital imaging has transformed computer vision and machine learning to new tools for analyzing pathology images. This trend could automate some of the tasks in the diagnostic pathology and elevate the pathologist workload. The final step of any cancer diagnosis procedure is performed by the expert pathologist. These experts use microscopes with high level of optical magnification to observe minute characteristics of the tissue acquired through biopsy and fixed on glass slides. Switching between different magnifications, and finding the magnification level at which they identify the presence or absence of malignant tissues is important. As the majority of pathologists still use light microscopy, compared to digital scanners, in many instance a mounted camera on the microscope is used to capture snapshots from significant field-of-views. Repositories of such snapshots usually do not contain the magnification information. In this paper, we extract deep features of the images available on TCGA dataset with known magnification to train a classifier for magnification recognition. We compared the results with LBP, a well-known handcrafted feature extraction method. The proposed approach achieved a mean accuracy of 96% when a multi-layer perceptron was trained as a classifier.