论文标题

迈向大脑数据的预测时空表示

Towards a predictive spatio-temporal representation of brain data

论文作者

Azevedo, Tiago, Passamonti, Luca, Liò, Pietro, Toschi, Nicola

论文摘要

大脑作为“连接组”的表征,其中连接在时间表之间由相关值表示,并作为图理论分析得出的摘要措施在过去几年中非常受欢迎。但是,尽管这种表示已经提高了我们对大脑功能的理解,但它可能代表了一个过度简化的模型。这是因为典型的fMRI数据集由在空间(即大脑区域的位置)变化的复杂且高度异构的时间表构成。我们比较了从深度学习和几何深度学习的各种建模技术,再到为未来的研究铺平道路,以有效利用典型的fMRI数据集的丰富空间和时间领域以及其他类似的数据集。作为概念验证,我们比较了在监督的二进制分类任务上的均质和公开可用的人类连接项目(HCP)数据集中的方法。我们希望,相对于以前的“连接瘤”措施,我们的方法论进步最终可以通过对健康和疾病中脑动力学有更细微的了解,在临床和计算上具有相关性。对大脑的这种理解可以从根本上减少恒定的专业临床专业知识,以便准确了解大脑的可变性。

The characterisation of the brain as a "connectome", in which the connections are represented by correlational values across timeseries and as summary measures derived from graph theory analyses, has been very popular in the last years. However, although this representation has advanced our understanding of the brain function, it may represent an oversimplified model. This is because the typical fMRI datasets are constituted by complex and highly heterogeneous timeseries that vary across space (i.e., location of brain regions). We compare various modelling techniques from deep learning and geometric deep learning to pave the way for future research in effectively leveraging the rich spatial and temporal domains of typical fMRI datasets, as well as of other similar datasets. As a proof-of-concept, we compare our approaches in the homogeneous and publicly available Human Connectome Project (HCP) dataset on a supervised binary classification task. We hope that our methodological advances relative to previous "connectomic" measures can ultimately be clinically and computationally relevant by leading to a more nuanced understanding of the brain dynamics in health and disease. Such understanding of the brain can fundamentally reduce the constant specialised clinical expertise in order to accurately understand brain variability.

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